Global Certificate in Phylogenetic Modeling and Inference
-- ViewingNowThe Global Certificate in Phylogenetic Modeling and Inference is a comprehensive course that equips learners with essential skills in analyzing and interpreting evolutionary relationships among organisms. This certification program covers various aspects of phylogenetic modeling, including probabilistic graphical models, Bayesian inference, and maximum likelihood methods.
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⢠Introduction to Phylogenetic Modeling: Basic concepts, tree thinking, types of phylogenetic trees, and the importance of phylogenetic models.
⢠Data Types and Formats: DNA, RNA, protein and morphological data, sequence alignment, and data formatting for phylogenetic analysis.
⢠Phylogenetic Tree Reconstruction Methods: Distance-based, parsimony, and likelihood methods, with examples from commonly used software like MEGA, PAUP*, and RAxML.
⢠Model Selection and Evaluation: Model testing, bootstrapping, and other methods to assess the reliability and accuracy of phylogenetic trees.
⢠Bayesian Inference in Phylogenetics: Overview of Bayesian theory, Markov Chain Monte Carlo (MCMC) methods, and Bayesian phylogenetic software like MrBayes and BEAST.
⢠Comparative Methods: Phylogenetic comparative methods for trait evolution analysis, including independent contrasts, phylogenetic regression, and ancestral state estimation.
⢠Divergence Time Estimation: Molecular clock, relaxed clock models, and fossil calibration for dating divergence times in phylogenetic trees.
⢠Network Phylogenetics: Phylogenetic networks, reticulate evolution, and applications in hybridization, recombination, and lateral gene transfer.
⢠Big Data and High-Performance Computing: Handling large datasets, parallel computing, and cloud computing for phylogenetic analysis.
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